STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTX1RING-type domain-containing protein. (642 aa)    
Predicted Functional Partners:
Z043_104341
Neurogenic locus notch protein-like.
    
 0.823
notch1
Neurogenic locus notch protein-like.
    
 0.823
LOC108919855
Uncharacterized protein.
    
 0.789
Z043_109790
Neurogenic locus notchprotein 2-like.
    
 0.764
ENSSFOP00015019474
Neurogenic locus notch homolog protein 2-like.
    
  0.670
LOC108938297
NEDD4-like E3 ubiquitin-protein ligase WWP1-like.
    
 0.638
WWP1
E3 ubiquitin-protein ligase.
    
 0.638
itch
E3 ubiquitin-protein ligase.
    
 0.638
LOC108918588
E3 ubiquitin-protein ligase Itchy-like.
    
 0.638
wwp2
Uncharacterized protein.
    
 0.638
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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