STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108920903Calcium-activated potassium channel subunit alpha-1-like. (1232 aa)    
Predicted Functional Partners:
KCNMB4
Uncharacterized protein.
    
 0.877
KCNMB4-2
Calcium-activated potassium channel subunit beta-4-like.
    
 0.798
Z043_104317
Calcium-activated potassium channel subunit beta-2-like.
    
 0.506
LOC108921545
Calcium-activated potassium channel subunit beta-2-like.
    
 0.506
ctnnal1
Uncharacterized protein.
   
 
 0.464
kcnn4
CaMBD domain-containing protein.
      
 0.447
CACNA2D3
VWFA domain-containing protein.
  
  
 0.425
crbn
Protein cereblon-like.
    
 
 0.424
Z043_101108
Uncharacterized protein.
     
 0.421
Z043_112028
Voltage-dependent calcium channel subunit alpha-2/delta-3-like.
  
  
 0.419
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.