STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108942334ATP-binding cassette sub-family F member 2-like. (617 aa)    
Predicted Functional Partners:
mrpl20
39S ribosomal protein L20, mitochondrial-like.
  
 
 0.843
mrpl27
39S ribosomal protein L27, mitochondrial-like.
  
 
 0.831
rpl35
60S ribosomal protein L35-like.
   
 
 0.818
rps18
40S ribosomal protein S18-like; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.813
Rpl23a
60S ribosomal protein L23a-like; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.812
rpl11
60S ribosomal protein L11-like; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.808
Z043_103089
Mitochondrial 39S ribosomal protein l33-like.
   
 
 0.805
LOC108921092
Eukaryotic translation initiation factor 2 subunit 1-like.
   
 0.796
ENSSFOP00015019931
annotation not available
   
 
 0.792
abce1
ATP-binding cassette sub-family E member 1-like.
   
 
 0.792
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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