STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108920060Putative global transcription activator SNF2L1. (1024 aa)    
Predicted Functional Partners:
Z043_118379
Bromodomain adjacent to zinc finger domain protein 1A-like.
    
 0.924
baz1b
Tyrosine-protein kinase BAZ1B-like.
   
 0.890
pole3
DNA polymerase epsilon subunit 3-like.
    
 0.871
Z043_105198
Cat eye syndrome critical region protein 2-like.
    
 0.805
Z043_104548
Bromo domain-containing protein.
    
 0.805
RSF1
Remodeling and spacing factor 1-like.
   
 0.797
Z043_109772
DDT domain-containing protein.
   
 0.797
chrac1
Chromatin accessibility complex protein 1 isoform X1.
    
 
 0.795
RBBP4
Histone-binding protein RBBP4-like.
   
 0.792
LOC108933239
Histone-binding protein RBBP7-like.
   
 0.792
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.