STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108930141AT-rich interactive domain-containing protein 3B-like. (609 aa)    
Predicted Functional Partners:
Z043_114662
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
    
 
 0.579
SAP30L
Histone deacetylase complex subunit SAP30L-like.
    
 0.530
SAP30L-2
Histone deacetylase complex subunit SAP30L-like.
    
 0.530
PBRM1
Protein polybromo-1-like.
   
 
 0.485
Z043_106739
Protein polybromo-1-like.
   
 
 0.485
sap18
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
     
 0.482
Z043_115791
Breast cancer metastasis-suppressor 1-like protein-A-like.
    
 0.458
brms1l
Breast cancer metastasis-suppressor 1-like protein-A-like.
    
 0.458
ENSSFOP00015040141
BRMS1 transcriptional repressor and anoikis regulator.
    
 0.458
suds3
Sin3 histone deacetylase corepressor complex component SDS3-like.
    
 0.458
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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