STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxo28F-box domain-containing protein. (356 aa)    
Predicted Functional Partners:
LOC108929701
S-phase kinase-associated protein 1-like; Belongs to the SKP1 family.
    
 
 0.711
SKP1
S-phase kinase-associated protein 1.
    
 
 0.711
LOC108935504
Cullin-1-like; Belongs to the cullin family.
   
 
 0.667
CUL1
Cullin-1-like; Belongs to the cullin family.
   
 
 0.667
KLHL28
Kelch-like protein 28-like.
      
 0.572
cuedc2
CUE domain-containing protein 2-like.
      
 0.571
fbxo4
F-box only protein 4-like.
      
 0.554
fbxo9
F-box only protein 9-like.
      
 0.554
impact
Impact RWD domain protein.
      
 0.554
cul3
Cullin-3-like; Belongs to the cullin family.
   
 
 0.540
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.