STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108921301Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (247 aa)    
Predicted Functional Partners:
gosr2
Golgi SNAP receptor complex member 2-like.
   
 0.975
bet1
Blocked early in transport 1.
    
 0.968
BET1L
BET1 protein-like.
    
 0.957
Z043_104875
General vesicular transport factor p115-like.
    
 0.939
LOC108934883
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.936
Z043_120627
Syntaxin-5-like; Belongs to the syntaxin family.
    
 0.936
LOC108920265
Syntaxin-5-like; Belongs to the syntaxin family.
    
 0.936
YKT6
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.936
scfd1
Sec1 family domain-containing protein 1-like; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.919
gosr1
Golgi snap receptor complex member 1-like.
  
  
 
0.901
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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