STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108938825Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (479 aa)    
Predicted Functional Partners:
Gabra2
Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.704
LOC108934163
Gamma-aminobutyric acid receptor subunit gamma-2-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.695
GABRG2
Gamma-aminobutyric acid receptor subunit gamma-2-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.694
Z043_119879
Gamma-aminobutyric acid receptor subunit gamma-1-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.693
GABRA1
Gamma-aminobutyric acid receptor subunit alpha-1-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.689
LOC108934432
Gamma-aminobutyric acid receptor subunit alpha-1-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.687
GABRG3
Neur_chan_memb domain-containing protein.
   
0.683
LOC108920501
Neur_chan_memb domain-containing protein.
   
0.683
Z043_106211
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.682
gabra5
Neur_chan_memb domain-containing protein.
  
0.681
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.