STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lto1Oral cancer overexpressed 1-like. (164 aa)    
Predicted Functional Partners:
yae1
Yae1 domain-containing protein 1-like.
   
 
 0.899
ENSSFOP00015019931
annotation not available
    
 
 0.833
abce1
ATP-binding cassette sub-family E member 1-like.
    
 
 0.833
mms19
MMS19 nucleotide excision repair protein-like.
    
 
 0.600
ciapin1
Anamorsin-B-like.
      
 0.568
mettl25
Methyltranfer_dom domain-containing protein.
   
  
 0.528
ciao2b
Mitotic spindle-associated MMXD complex subunit MIP18-like.
      
 0.524
iba57
Uncharacterized protein.
      
 0.508
ndor1
NADPH-dependent diflavin oxidoreductase 1-like.
      
 0.497
Fgf19
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.445
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.