STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kctd6BTB/POZ domain-containing protein KCTD6-like. (317 aa)    
Predicted Functional Partners:
cul3
Cullin-3-like; Belongs to the cullin family.
    
 0.866
commd1
Uncharacterized protein.
     
 0.551
Z043_106256
Uncharacterized protein.
      
 0.549
spryd3
B30.2/SPRY domain-containing protein.
      
 0.545
Fbxo45
F-box/SPRY domain-containing protein 1-like.
     
 0.530
LOC108918140
BTB/POZ domain-containing protein 6-like.
    
 0.526
btbd6
BTB/POZ domain-containing protein 6-like.
    
 0.526
ube2f
NEDD8-conjugating enzyme UBE2F isoform X1.
    
  0.522
ube2m
NEDD8-conjugating enzyme Ubc12-like; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.522
Z043_101706
NEDD8-activating enzyme E1 regulatory subunit-like.
     
 0.508
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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