STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114911295Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like. (657 aa)    
Predicted Functional Partners:
dag1
Dystroglycan-like.
     
 0.732
LOC108941942
Dystroglycan-like.
     
 0.732
pomt1
Protein O-mannosyl-transferase 1-like.
      
 0.549
lin52
Protein O-mannosyl-transferase 2-like.
      
 0.548
fktn
Fukutin-like.
      
 0.547
fkrp
Fukutin-related protein-like.
      
 0.538
rxylt1
Uncharacterized protein.
    
 
 0.535
Pomgnt2
Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2-like.
      
 0.517
pomk
Protein kinase domain-containing protein.
    
 
 0.510
dolk
Dolichol kinase-like.
   
  
 0.447
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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