STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFOP00015071247Sorbin and SH3 domain containing 1. (1470 aa)    
Predicted Functional Partners:
LOC108939667
Vinculin-like.
   
 0.787
VCL
Vinculin-like.
   
 0.787
vta1
Vacuolar protein sorting-associated protein VTA1-like.
    
   0.745
ENSSFOP00015005644
annotation not available
    
   0.554
LOC108931478
GTP cyclohydrolase 1-like.
    
   0.554
gch1
GTP_cyclohydroI domain-containing protein.
    
   0.554
Z043_108306
GTP cyclohydrolase 1-like.
    
   0.554
LOC108929911
Talin-1-like.
   
 
 0.550
sh3pxd2b
SH3 and PX domain-containing protein 2B-like.
   
 0.538
ncf1
Neutrophil cytosol factor 1-like.
   
 0.538
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.