STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z043_121233AFG3-like protein 1-like; Belongs to the AAA ATPase family. (751 aa)    
Predicted Functional Partners:
phb
Prohibitin.
   
 0.865
phb2
Prohibitin.
   
 0.820
mrpl2
39S ribosomal protein L2, mitochondrial-like.
   
 
 0.755
NDUFA13
Uncharacterized protein.
   
 
 0.754
timmdc1
CC001 protein-like.
   
   0.746
mrpl13
39S ribosomal protein L13, mitochondrial-like; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.735
mrpl27
39S ribosomal protein L27, mitochondrial-like.
  
 
 0.731
mrps11
28S ribosomal protein S11, mitochondrial-like; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.723
mrpl17
Ribosomal protein L17 mitochondrial-like protein-like; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.721
mrps14
Mitochondrial 28S ribosomal protein s14-like.
   
 
 0.718
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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