STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108938732Serine/threonine-protein kinase ppk4-like. (925 aa)    
Predicted Functional Partners:
ENSSFOP00015045656
Endoplasmic reticulum chaperone BiP-like.
    
 0.824
Z043_111911
78 kDa glucose-regulated protein-like; Belongs to the heat shock protein 70 family.
    
 0.824
LOC108938559
78 kDa glucose-regulated protein-like; Belongs to the heat shock protein 70 family.
    
 0.824
sec63
Translocation protein SEC63-like.
    
 
 0.658
ENSSFOP00015019931
annotation not available
   
 0.621
abce1
ATP-binding cassette sub-family E member 1-like.
   
 0.621
syvn1
Synovial apoptosis inhibitor 1, synoviolin-like.
    
 
 0.581
Z043_122333
E3 ubiquitin-protein ligase AMFR-like.
    
 
 0.581
AMFR
E3 ubiquitin-protein ligase AMFR-like.
    
 
 0.581
mib2
Uncharacterized protein.
    
 0.516
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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