STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cystm1Uncharacterized protein. (114 aa)    
Predicted Functional Partners:
UNC79
Protein unc-79-like.
    
 0.822
LOC108920546
E3 SUMO-protein ligase RanBP2-like.
    
 0.613
RANBP2
E3 SUMO-protein ligase RanBP2-like.
    
 0.613
ash2l
Set1/Ash2 histone methyltransferase complex subunit ASH2-like.
    
 0.566
rbbp5
Retinoblastoma-binding protein 5-like.
    
 0.565
Tep1
Uncharacterized protein.
   
 0.549
LOC108934098
Lysine-specific demethylase 6B-like.
    
 0.509
LOC108920542
Lysine-specific demethylase 6A-like.
    
 0.509
KDM6B
Lysine-specific demethylase 6B-like.
    
 0.509
LOC108933158
Lysine-specific demethylase 6A-like.
    
 0.509
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.