STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108931944Transmembrane gamma-carboxyglutamic acid protein 1-like. (197 aa)    
Predicted Functional Partners:
ggcx
Vitamin K-dependent gamma-carboxylase-like.
    
 
 0.581
cmtm3
Uncharacterized protein.
      
 0.473
perp
P53 apoptosis effector related to PMP-22.
  
   
 0.465
Z043_125164
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
      
 0.444
rffl
RING-type domain-containing protein.
      
 0.432
LOC108924744
E3 ubiquitin-protein ligase rififylin-like.
      
 0.432
slc44a1
Choline transporter-like protein 1-like; Belongs to the CTL (choline transporter-like) family.
      
 0.412
LOC108938799
Choline transporter-like protein 1-like; Belongs to the CTL (choline transporter-like) family.
      
 0.412
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.