STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108932940Uncharacterized protein. (676 aa)    
Predicted Functional Partners:
Z043_108194
Zinc finger CCHC domain-containing protein 7-like.
   
 
 0.769
mtrex
Superkiller viralicidic activity 2-like 2-like.
   
 
 0.746
exosc10
HRDC domain-containing protein.
   
 
 0.707
Zcchc14
SAM domain-containing protein.
   
 
 0.705
SCAF8
Protein SCAF8-like.
    
 
 0.651
RAMAC
RNA guanine-N7 methyltransferase activating subunit.
    
 
 0.580
Skiv2l
Helicase SKI2W-like.
   
 
 0.566
CNOT9
Cell differentiation protein RCD1-like.
    
   0.554
LOC108930131
CCR4-NOT transcription complex subunit 9-like.
    
   0.554
ipo7
Importin N-terminal domain-containing protein.
   
 
 0.470
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.