STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108919304Zinc fingers and homeoboxes protein 2-like. (940 aa)    
Predicted Functional Partners:
LOC108922373
Rab5 GDP/GTP exchange factor-like.
   
 0.929
LOC108928030
Rab5 GDP/GTP exchange factor-like.
   
 0.929
LOC108934753
Rab5 GDP/GTP exchange factor-like.
   
 0.929
appl1
DCC-interacting protein 13-alpha-like.
    
 
 0.848
appl2
Uncharacterized protein.
    
 
 0.848
rbsn
Rabenosyn-5-like.
   
 0.809
Z043_104959
Cyclin-G-associated kinase-like.
   
 0.738
Ankfy1
Rabankyrin-5-like.
   
 0.675
vps45
Vacuolar protein sorting-associated protein 45-like; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.670
gdi2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.661
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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