STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frmd8FERM domain-containing protein 8-like. (476 aa)    
Predicted Functional Partners:
Itgb1bp1
Integrin beta-1-binding protein 1-like.
    
 
 0.831
znrd2
Sjoegren syndrome/scleroderma autoantigen 1-like.
      
 0.555
Pdcd10
Programmed cell death protein 10-like.
    
 
 0.550
C17h12orf43
Uncharacterized protein.
   
    0.512
SNX31
PX domain-containing protein.
    
 
 0.486
snx27
Sorting nexin family member 27b-like.
    
 
 0.486
snx17
Sorting nexin-17-like.
    
 
 0.486
Z043_104785
Potassium channel subfamily K member 1-like; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.443
LOC108919785
Vesicle-trafficking protein SEC22b-B-like; Belongs to the synaptobrevin family.
      
 0.442
LOC108921731
Vesicle-trafficking protein SEC22b-B-like; Belongs to the synaptobrevin family.
      
 0.442
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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