STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z043_112487Poly(A) polymerase gamma-like. (722 aa)    
Predicted Functional Partners:
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.952
cpsf4
Cleavage and polyadenylation specificity factor subunit 4-like.
    
 0.949
cpsf3
Cleavage and polyadenylation specificity factor subunit 3-like.
   
 0.948
sympk
Uncharacterized protein.
   
 0.948
WDR33
Pre-mRNA 3' end processing protein WDR33-like.
   
 0.945
Cpsf1
Cleavage and polyadenylation specificity factor subunit 1-like.
   
 0.942
cstf3
Cleavage stimulation factor subunit 3-like.
    
 0.935
cstf2
Cleavage stimulation factor subunit 2-like.
    
 0.932
LOC108928989
Fip1 domain-containing protein.
   
 0.887
Fip1l1
Pre-mRNA 3'-end-processing factor FIP1-like.
   
 0.887
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.