STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS57596.1Anti-anti-sigma factor. (96 aa)    
Predicted Functional Partners:
SDS57550.1
PAS domain S-box-containing protein.
  
 0.996
SDT28143.1
Response regulator receiver domain-containing protein.
  
 0.934
SDT72865.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 0.934
SDT72910.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 0.921
SDT58432.1
PAS domain S-box-containing protein.
  
 
 0.815
SDT46754.1
His Kinase A (phospho-acceptor) domain-containing protein.
  
 
 0.806
SDT78222.1
GAF domain-containing protein.
  
 
 0.755
SDT77806.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 0.743
SDT43866.1
Hpt domain-containing protein.
  
 
 0.727
SDT46905.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
  
 
 0.727
Your Current Organism:
Actinoplanes derwentensis
NCBI taxonomy Id: 113562
Other names: A. derwentensis, ATCC 49798, DSM 43941, IFO 14935, JCM 7556, NBRC 14935, NCIB 12875, NCIB:12875, NCIMB 12875, NRRL B-16692, strain LA 107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.