Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS10947.1 | SDS92480.1 | SAMN04489716_0029 | SAMN04489716_1995 | Uncharacterized conserved protein, DUF1778 family. | Ribosomal protein S18 acetylase RimI. | 0.535 |
SDS89570.1 | SDS92480.1 | SAMN04489716_1916 | SAMN04489716_1995 | Urea carboxylase. | Ribosomal protein S18 acetylase RimI. | 0.590 |
SDS89570.1 | argB | SAMN04489716_1916 | SAMN04489716_8933 | Urea carboxylase. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.657 |
SDS92389.1 | SDS92439.1 | SAMN04489716_1993 | SAMN04489716_1994 | Hypothetical protein. | Endo-1,4-beta-xylanase. | 0.631 |
SDS92389.1 | SDS92480.1 | SAMN04489716_1993 | SAMN04489716_1995 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.454 |
SDS92439.1 | SDS92389.1 | SAMN04489716_1994 | SAMN04489716_1993 | Endo-1,4-beta-xylanase. | Hypothetical protein. | 0.631 |
SDS92439.1 | SDS92480.1 | SAMN04489716_1994 | SAMN04489716_1995 | Endo-1,4-beta-xylanase. | Ribosomal protein S18 acetylase RimI. | 0.545 |
SDS92480.1 | SDS10947.1 | SAMN04489716_1995 | SAMN04489716_0029 | Ribosomal protein S18 acetylase RimI. | Uncharacterized conserved protein, DUF1778 family. | 0.535 |
SDS92480.1 | SDS89570.1 | SAMN04489716_1995 | SAMN04489716_1916 | Ribosomal protein S18 acetylase RimI. | Urea carboxylase. | 0.590 |
SDS92480.1 | SDS92389.1 | SAMN04489716_1995 | SAMN04489716_1993 | Ribosomal protein S18 acetylase RimI. | Hypothetical protein. | 0.454 |
SDS92480.1 | SDS92439.1 | SAMN04489716_1995 | SAMN04489716_1994 | Ribosomal protein S18 acetylase RimI. | Endo-1,4-beta-xylanase. | 0.545 |
SDS92480.1 | SDT73085.1 | SAMN04489716_1995 | SAMN04489716_6572 | Ribosomal protein S18 acetylase RimI. | Uncharacterized conserved protein, DUF1778 family; Manually curated. | 0.535 |
SDS92480.1 | argB | SAMN04489716_1995 | SAMN04489716_8933 | Ribosomal protein S18 acetylase RimI. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.693 |
SDS92480.1 | argJ | SAMN04489716_1995 | SAMN04489716_8932 | Ribosomal protein S18 acetylase RimI. | Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.693 |
SDS92480.1 | crcB | SAMN04489716_1995 | SAMN04489716_1996 | Ribosomal protein S18 acetylase RimI. | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.450 |
SDS92480.1 | crcB-2 | SAMN04489716_1995 | SAMN04489716_1997 | Ribosomal protein S18 acetylase RimI. | Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.450 |
SDT73085.1 | SDS92480.1 | SAMN04489716_6572 | SAMN04489716_1995 | Uncharacterized conserved protein, DUF1778 family; Manually curated. | Ribosomal protein S18 acetylase RimI. | 0.535 |
argB | SDS89570.1 | SAMN04489716_8933 | SAMN04489716_1916 | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Urea carboxylase. | 0.657 |
argB | SDS92480.1 | SAMN04489716_8933 | SAMN04489716_1995 | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Ribosomal protein S18 acetylase RimI. | 0.693 |
argB | argJ | SAMN04489716_8933 | SAMN04489716_8932 | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.999 |
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