STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT35280.1Helix-turn-helix domain-containing protein. (319 aa)    
Predicted Functional Partners:
SDT35256.1
Predicted arabinose efflux permease, MFS family.
 
     0.850
SDS32543.1
Phosphopantetheine attachment site.
  
     0.563
SDS32319.1
AAA ATPase domain-containing protein.
  
     0.535
SDT76002.1
Putative stress-induced transcription regulator.
  
     0.533
SDS97382.1
Hypothetical protein.
  
     0.513
SDT58663.1
Von Willebrand factor type A domain-containing protein.
  
     0.504
SDT70664.1
ABC-2 type transport system permease protein.
  
     0.487
SDT70675.1
ABC-2 type transport system permease protein.
  
     0.463
SDT35302.1
Superfamily II DNA or RNA helicase, SNF2 family.
       0.455
SDS32901.1
Hemerythrin HHE cation binding domain-containing protein.
  
     0.450
Your Current Organism:
Actinoplanes derwentensis
NCBI taxonomy Id: 113562
Other names: A. derwentensis, ATCC 49798, DSM 43941, IFO 14935, JCM 7556, NBRC 14935, NCIB 12875, NCIB:12875, NCIMB 12875, NRRL B-16692, strain LA 107
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