STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT37787.1Cellulose binding domain-containing protein; Belongs to the glycosyl hydrolase 12 (cellulase H) family. (380 aa)    
Predicted Functional Partners:
SDT78764.1
Pectate lyase.
  
  0.753
SDT53096.1
Pectate lyase.
  
  0.743
SDT72854.1
Pectate lyase.
  
  0.737
SDS46682.1
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
  
  0.732
SDT53506.1
Lysophospholipase L1.
 
  0.728
SDT69789.1
Cellulose binding domain-containing protein.
  
     0.711
SDT20333.1
Ricin-type beta-trefoil lectin domain-like.
  
     0.696
SDT38421.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
  0.692
SDS50421.1
Chitin-binding protein.
  
     0.670
SDT07904.1
Glycosyl hydrolase family 62.
  
     0.654
Your Current Organism:
Actinoplanes derwentensis
NCBI taxonomy Id: 113562
Other names: A. derwentensis, ATCC 49798, DSM 43941, IFO 14935, JCM 7556, NBRC 14935, NCIB 12875, NCIB:12875, NCIMB 12875, NRRL B-16692, strain LA 107
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