STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT41442.1P-aminobenzoate N-oxygenase AurF. (297 aa)    
Predicted Functional Partners:
SDT34299.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
  
 0.960
SDT34224.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 0.781
SDS11896.1
Ferredoxin-NADP reductase.
  
 0.765
SDT09524.1
Ferredoxin-NADP reductase.
  
 0.765
SDT33296.1
Ferredoxin-NADP reductase.
  
 0.765
SDT47653.1
Hypothetical protein.
 
 0.765
SDT52369.1
3-ketosteroid 9alpha-monooxygenase subunit B.
 
 0.765
SDT74788.1
Ferredoxin-NADP reductase.
  
 0.765
SDT41460.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.712
SDT80022.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
 
 
 0.580
Your Current Organism:
Actinoplanes derwentensis
NCBI taxonomy Id: 113562
Other names: A. derwentensis, ATCC 49798, DSM 43941, IFO 14935, JCM 7556, NBRC 14935, NCIB 12875, NCIB:12875, NCIMB 12875, NRRL B-16692, strain LA 107
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