Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDT16036.1 | SDT48194.1 | SAMN04489716_2693 | SAMN04489716_4022 | AraC-type DNA-binding protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.412 |
SDT16036.1 | SDT48209.1 | SAMN04489716_2693 | SAMN04489716_4023 | AraC-type DNA-binding protein. | Alpha-1,2-mannosidase, putative; Non-canonical start codon; manually curated. | 0.426 |
SDT48177.1 | SDT48194.1 | SAMN04489716_4021 | SAMN04489716_4022 | Hypothetical protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.642 |
SDT48177.1 | SDT48209.1 | SAMN04489716_4021 | SAMN04489716_4023 | Hypothetical protein. | Alpha-1,2-mannosidase, putative; Non-canonical start codon; manually curated. | 0.642 |
SDT48177.1 | SDT48233.1 | SAMN04489716_4021 | SAMN04489716_4024 | Hypothetical protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.642 |
SDT48177.1 | SDT48247.1 | SAMN04489716_4021 | SAMN04489716_4025 | Hypothetical protein. | Selenocysteine lyase/Cysteine desulfurase. | 0.491 |
SDT48194.1 | SDT16036.1 | SAMN04489716_4022 | SAMN04489716_2693 | Glycosyltransferase involved in cell wall bisynthesis. | AraC-type DNA-binding protein. | 0.412 |
SDT48194.1 | SDT48177.1 | SAMN04489716_4022 | SAMN04489716_4021 | Glycosyltransferase involved in cell wall bisynthesis. | Hypothetical protein. | 0.642 |
SDT48194.1 | SDT48209.1 | SAMN04489716_4022 | SAMN04489716_4023 | Glycosyltransferase involved in cell wall bisynthesis. | Alpha-1,2-mannosidase, putative; Non-canonical start codon; manually curated. | 0.952 |
SDT48194.1 | SDT48233.1 | SAMN04489716_4022 | SAMN04489716_4024 | Glycosyltransferase involved in cell wall bisynthesis. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.788 |
SDT48194.1 | SDT48247.1 | SAMN04489716_4022 | SAMN04489716_4025 | Glycosyltransferase involved in cell wall bisynthesis. | Selenocysteine lyase/Cysteine desulfurase. | 0.589 |
SDT48194.1 | SDT79236.1 | SAMN04489716_4022 | SAMN04489716_8701 | Glycosyltransferase involved in cell wall bisynthesis. | Protein of unknown function. | 0.510 |
SDT48209.1 | SDT16036.1 | SAMN04489716_4023 | SAMN04489716_2693 | Alpha-1,2-mannosidase, putative; Non-canonical start codon; manually curated. | AraC-type DNA-binding protein. | 0.426 |
SDT48209.1 | SDT48177.1 | SAMN04489716_4023 | SAMN04489716_4021 | Alpha-1,2-mannosidase, putative; Non-canonical start codon; manually curated. | Hypothetical protein. | 0.642 |
SDT48209.1 | SDT48194.1 | SAMN04489716_4023 | SAMN04489716_4022 | Alpha-1,2-mannosidase, putative; Non-canonical start codon; manually curated. | Glycosyltransferase involved in cell wall bisynthesis. | 0.952 |
SDT48209.1 | SDT48233.1 | SAMN04489716_4023 | SAMN04489716_4024 | Alpha-1,2-mannosidase, putative; Non-canonical start codon; manually curated. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.788 |
SDT48209.1 | SDT48247.1 | SAMN04489716_4023 | SAMN04489716_4025 | Alpha-1,2-mannosidase, putative; Non-canonical start codon; manually curated. | Selenocysteine lyase/Cysteine desulfurase. | 0.589 |
SDT48209.1 | SDT79236.1 | SAMN04489716_4023 | SAMN04489716_8701 | Alpha-1,2-mannosidase, putative; Non-canonical start codon; manually curated. | Protein of unknown function. | 0.480 |
SDT48233.1 | SDT48177.1 | SAMN04489716_4024 | SAMN04489716_4021 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.642 |
SDT48233.1 | SDT48194.1 | SAMN04489716_4024 | SAMN04489716_4022 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.788 |
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