STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT59826.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (419 aa)    
Predicted Functional Partners:
SDT59837.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.973
SDT59856.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.924
SDT44319.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.805
SDT59812.1
Alkanesulfonate monooxygenase.
       0.790
SDT43056.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
  
  0.777
SDT26076.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.772
SDT72106.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.772
SDT75576.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.772
SDT06402.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
  
  
  0.748
SDS46546.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
  
  0.742
Your Current Organism:
Actinoplanes derwentensis
NCBI taxonomy Id: 113562
Other names: A. derwentensis, ATCC 49798, DSM 43941, IFO 14935, JCM 7556, NBRC 14935, NCIB 12875, NCIB:12875, NCIMB 12875, NRRL B-16692, strain LA 107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.