STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT60320.1Glycosyl transferase family 2. (243 aa)    
Predicted Functional Partners:
SDT60305.1
3-oxoacyl-[acyl-carrier-protein] synthase-3.
 
     0.869
SDT60336.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
     0.869
SDT60368.1
Cytochrome P450.
 
 
   0.820
SDT60379.1
Nucleoside-diphosphate-sugar epimerase.
 
 
  0.747
SDT33140.1
Creatinine amidohydrolase.
  
  
 0.672
SDT60352.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.669
SDT60287.1
PAS domain S-box-containing protein.
  
  
 0.625
SDT77082.1
Polysaccharide deacetylase.
  
 
  0.482
SDS56613.1
Hypothetical protein.
  
     0.447
SDT69751.1
Dolichol-phosphate mannosyltransferase.
  
 
 0.444
Your Current Organism:
Actinoplanes derwentensis
NCBI taxonomy Id: 113562
Other names: A. derwentensis, ATCC 49798, DSM 43941, IFO 14935, JCM 7556, NBRC 14935, NCIB 12875, NCIB:12875, NCIMB 12875, NRRL B-16692, strain LA 107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.