STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT61189.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (477 aa)    
Predicted Functional Partners:
SDT61175.1
N-acetylglucosamine transport system permease protein.
 
 0.995
SDT61160.1
N-acetylglucosamine transport system permease protein.
 
 0.993
SDT23937.1
N-acetylglucosamine transport system permease protein.
 
 0.954
SDT23967.1
N-acetylglucosamine transport system permease protein.
 
 0.902
SDT81051.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.890
SDT61204.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.877
SDT61216.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.853
SDT81048.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.820
SDT81046.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
  
 
0.815
SDT23990.1
N-acetylglucosamine transport system substrate-binding protein.
  
  
 
0.781
Your Current Organism:
Actinoplanes derwentensis
NCBI taxonomy Id: 113562
Other names: A. derwentensis, ATCC 49798, DSM 43941, IFO 14935, JCM 7556, NBRC 14935, NCIB 12875, NCIB:12875, NCIMB 12875, NRRL B-16692, strain LA 107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.