STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT61499.1NagD protein; Belongs to the HAD-like hydrolase superfamily. (259 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
       0.867
SDT61490.1
ADP-ribose pyrophosphatase YjhB, NUDIX family.
       0.790
SDT61527.1
Enoyl-[acyl-carrier-protein] reductase [NADH].
       0.775
SDT74059.1
Glycerol-1-phosphate dehydrogenase [NAD(P)+].
  
 
 0.689
SDT61540.1
3-oxoacyl-[acyl-carrier-protein] reductase.
    
  0.680
SDT61462.1
Hypothetical protein.
       0.678
SDT61475.1
50S ribosome-binding GTPase.
       0.678
SDT77565.1
Hypothetical protein.
      
 0.609
cysC
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
  
   0.551
SDT80972.1
Pyridoxal kinase; Belongs to the pyridoxine kinase family.
    
 0.516
Your Current Organism:
Actinoplanes derwentensis
NCBI taxonomy Id: 113562
Other names: A. derwentensis, ATCC 49798, DSM 43941, IFO 14935, JCM 7556, NBRC 14935, NCIB 12875, NCIB:12875, NCIMB 12875, NRRL B-16692, strain LA 107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.