Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS57550.1 | SDT64474.1 | SAMN04489716_1092 | SAMN04489716_5146 | PAS domain S-box-containing protein. | DNA polymerase-3 subunit epsilon. | 0.438 |
SDS57550.1 | SDT67694.1 | SAMN04489716_1092 | SAMN04489716_5511 | PAS domain S-box-containing protein. | Competence protein ComEC. | 0.943 |
SDS57550.1 | SDT69651.1 | SAMN04489716_1092 | SAMN04489716_5805 | PAS domain S-box-containing protein. | Type IV pilus assembly protein PilB. | 0.497 |
SDS57550.1 | SDT69873.1 | SAMN04489716_1092 | SAMN04489716_5843 | PAS domain S-box-containing protein. | Predicted amidophosphoribosyltransferases. | 0.838 |
SDS57550.1 | SDT77731.1 | SAMN04489716_1092 | SAMN04489716_8080 | PAS domain S-box-containing protein. | DNA processing protein. | 0.780 |
SDS57550.1 | pheT | SAMN04489716_1092 | SAMN04489716_8911 | PAS domain S-box-containing protein. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.418 |
SDT64474.1 | SDS57550.1 | SAMN04489716_5146 | SAMN04489716_1092 | DNA polymerase-3 subunit epsilon. | PAS domain S-box-containing protein. | 0.438 |
SDT64474.1 | SDT67687.1 | SAMN04489716_5146 | SAMN04489716_5510 | DNA polymerase-3 subunit epsilon. | DNA polymerase III, delta subunit. | 0.975 |
SDT64474.1 | SDT67694.1 | SAMN04489716_5146 | SAMN04489716_5511 | DNA polymerase-3 subunit epsilon. | Competence protein ComEC. | 0.800 |
SDT64474.1 | pheT | SAMN04489716_5146 | SAMN04489716_8911 | DNA polymerase-3 subunit epsilon. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.708 |
SDT67687.1 | SDT64474.1 | SAMN04489716_5510 | SAMN04489716_5146 | DNA polymerase III, delta subunit. | DNA polymerase-3 subunit epsilon. | 0.975 |
SDT67687.1 | SDT67694.1 | SAMN04489716_5510 | SAMN04489716_5511 | DNA polymerase III, delta subunit. | Competence protein ComEC. | 0.864 |
SDT67687.1 | SDT67698.1 | SAMN04489716_5510 | SAMN04489716_5512 | DNA polymerase III, delta subunit. | SLBB domain-containing protein. | 0.665 |
SDT67687.1 | pheT | SAMN04489716_5510 | SAMN04489716_8911 | DNA polymerase III, delta subunit. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.402 |
SDT67694.1 | SDS57550.1 | SAMN04489716_5511 | SAMN04489716_1092 | Competence protein ComEC. | PAS domain S-box-containing protein. | 0.943 |
SDT67694.1 | SDT64474.1 | SAMN04489716_5511 | SAMN04489716_5146 | Competence protein ComEC. | DNA polymerase-3 subunit epsilon. | 0.800 |
SDT67694.1 | SDT67687.1 | SAMN04489716_5511 | SAMN04489716_5510 | Competence protein ComEC. | DNA polymerase III, delta subunit. | 0.864 |
SDT67694.1 | SDT67698.1 | SAMN04489716_5511 | SAMN04489716_5512 | Competence protein ComEC. | SLBB domain-containing protein. | 0.957 |
SDT67694.1 | SDT69627.1 | SAMN04489716_5511 | SAMN04489716_5801 | Competence protein ComEC. | Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.770 |
SDT67694.1 | SDT69640.1 | SAMN04489716_5511 | SAMN04489716_5803 | Competence protein ComEC. | Type IV pilus assembly protein PilC. | 0.914 |
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