node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDT68351.1 | rplD | SAMN04489716_5610 | SAMN04489716_6136 | ATP-binding cassette protein, ChvD family. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.924 |
SDT68351.1 | rplM | SAMN04489716_5610 | SAMN04489716_6087 | ATP-binding cassette protein, ChvD family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.924 |
SDT68351.1 | rplT | SAMN04489716_5610 | SAMN04489716_8908 | ATP-binding cassette protein, ChvD family. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.933 |
SDT68351.1 | rplU | SAMN04489716_5610 | SAMN04489716_5526 | ATP-binding cassette protein, ChvD family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.927 |
SDT68351.1 | rplW | SAMN04489716_5610 | SAMN04489716_6135 | ATP-binding cassette protein, ChvD family. | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.930 |
SDT68351.1 | rplY | SAMN04489716_5610 | SAMN04489716_7576 | ATP-binding cassette protein, ChvD family. | LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.927 |
SDT68351.1 | rpsC | SAMN04489716_5610 | SAMN04489716_6131 | ATP-binding cassette protein, ChvD family. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.924 |
SDT68351.1 | rpsO | SAMN04489716_5610 | SAMN04489716_8129 | ATP-binding cassette protein, ChvD family. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.925 |
SDT68351.1 | rpsR | SAMN04489716_5610 | SAMN04489716_6783 | ATP-binding cassette protein, ChvD family. | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.929 |
SDT68351.1 | rpsT | SAMN04489716_5610 | SAMN04489716_5508 | ATP-binding cassette protein, ChvD family. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.929 |
rplD | SDT68351.1 | SAMN04489716_6136 | SAMN04489716_5610 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | ATP-binding cassette protein, ChvD family. | 0.924 |
rplD | rplM | SAMN04489716_6136 | SAMN04489716_6087 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplD | rplT | SAMN04489716_6136 | SAMN04489716_8908 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.998 |
rplD | rplU | SAMN04489716_6136 | SAMN04489716_5526 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.997 |
rplD | rplW | SAMN04489716_6136 | SAMN04489716_6135 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
rplD | rplY | SAMN04489716_6136 | SAMN04489716_7576 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.994 |
rplD | rpsC | SAMN04489716_6136 | SAMN04489716_6131 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
rplD | rpsO | SAMN04489716_6136 | SAMN04489716_8129 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
rplD | rpsR | SAMN04489716_6136 | SAMN04489716_6783 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.995 |
rplD | rpsT | SAMN04489716_6136 | SAMN04489716_5508 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.990 |