Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDS33379.1 | SDT68664.1 | SAMN04489716_0553 | SAMN04489716_5657 | Transcriptional regulator, AraC family. | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.921 |
| SDS33379.1 | rpoA | SAMN04489716_0553 | SAMN04489716_6109 | Transcriptional regulator, AraC family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.967 |
| SDS33379.1 | rpoB | SAMN04489716_0553 | SAMN04489716_6146 | Transcriptional regulator, AraC family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.933 |
| SDS33379.1 | rpoC | SAMN04489716_0553 | SAMN04489716_6145 | Transcriptional regulator, AraC family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.929 |
| SDS33379.1 | rpoZ | SAMN04489716_0553 | SAMN04489716_8883 | Transcriptional regulator, AraC family. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.929 |
| SDS63553.1 | SDT68664.1 | SAMN04489716_1238 | SAMN04489716_5657 | Effector-binding domain-containing protein. | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.921 |
| SDS63553.1 | rpoA | SAMN04489716_1238 | SAMN04489716_6109 | Effector-binding domain-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.932 |
| SDS63553.1 | rpoB | SAMN04489716_1238 | SAMN04489716_6146 | Effector-binding domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.941 |
| SDS63553.1 | rpoC | SAMN04489716_1238 | SAMN04489716_6145 | Effector-binding domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.932 |
| SDS63553.1 | rpoZ | SAMN04489716_1238 | SAMN04489716_8883 | Effector-binding domain-containing protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.932 |
| SDT67353.1 | SDT68664.1 | SAMN04489716_5462 | SAMN04489716_5657 | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.931 |
| SDT67353.1 | rpoA | SAMN04489716_5462 | SAMN04489716_6109 | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.949 |
| SDT67353.1 | rpoB | SAMN04489716_5462 | SAMN04489716_6146 | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.926 |
| SDT67353.1 | rpoC | SAMN04489716_5462 | SAMN04489716_6145 | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.926 |
| SDT67353.1 | rpoZ | SAMN04489716_5462 | SAMN04489716_8883 | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.924 |
| SDT68664.1 | SDS33379.1 | SAMN04489716_5657 | SAMN04489716_0553 | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator, AraC family. | 0.921 |
| SDT68664.1 | SDS63553.1 | SAMN04489716_5657 | SAMN04489716_1238 | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Effector-binding domain-containing protein. | 0.921 |
| SDT68664.1 | SDT67353.1 | SAMN04489716_5657 | SAMN04489716_5462 | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | 0.931 |
| SDT68664.1 | SDT75519.1 | SAMN04489716_5657 | SAMN04489716_7326 | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator, CarD family. | 0.937 |
| SDT68664.1 | rbpA | SAMN04489716_5657 | SAMN04489716_0562 | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.946 |
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