STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT75540.1Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. (398 aa)    
Predicted Functional Partners:
SDT06452.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
 
  0.782
SDT75605.1
Glucokinase.
  
     0.767
SDS51452.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
     0.763
SDT80121.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
     0.763
SDT77359.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
     0.749
SDS24049.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
     0.730
SDT69004.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
     0.725
SDT64347.1
Glucokinase.
 
  
 
0.665
SDT75541.1
Predicted arabinose efflux permease, MFS family.
       0.571
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.549
Your Current Organism:
Actinoplanes derwentensis
NCBI taxonomy Id: 113562
Other names: A. derwentensis, ATCC 49798, DSM 43941, IFO 14935, JCM 7556, NBRC 14935, NCIB 12875, NCIB:12875, NCIMB 12875, NRRL B-16692, strain LA 107
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