STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT76431.1L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. (209 aa)    
Predicted Functional Partners:
SDT76435.1
Hypothetical protein.
  
    0.811
SDT76438.1
Hypothetical protein.
       0.729
SDT76429.1
Protein of unknown function.
       0.590
SDT70164.1
Amino acid adenylation domain-containing protein.
  
  
 0.519
SDT63768.1
Protein of unknown function.
  
     0.514
SDT76441.1
Predicted N-acetyltransferase YhbS.
       0.504
SDT79187.1
Lsr2 protein.
  
     0.437
SDT64617.1
Cytochrome c oxidase subunit IV.
  
   
 0.434
SDT70896.1
Phosphatidylserine decarboxylase.
   
   0.413
SDT10716.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
  
 0.409
Your Current Organism:
Actinoplanes derwentensis
NCBI taxonomy Id: 113562
Other names: A. derwentensis, ATCC 49798, DSM 43941, IFO 14935, JCM 7556, NBRC 14935, NCIB 12875, NCIB:12875, NCIMB 12875, NRRL B-16692, strain LA 107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.