STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT76839.1Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family. (448 aa)    
Predicted Functional Partners:
SDT76842.1
Hypothetical protein.
 
     0.850
SDT64368.1
Polyketide cyclase / dehydrase and lipid transport.
  
 
 
 0.801
SDT75765.1
Helix-turn-helix.
  
     0.691
SDT76019.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.656
SDT75257.1
Anion-transporting ATPase, ArsA/GET3 family.
  
     0.625
SDT76844.1
Hypothetical protein.
       0.620
SDT75261.1
Anion-transporting ATPase, ArsA/GET3 family.
  
     0.608
SDT75968.1
Putative sensory transduction regulator.
  
     0.568
SDT76046.1
Porphobilinogen synthase; Belongs to the ALAD family.
    
 0.557
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
    
 0.512
Your Current Organism:
Actinoplanes derwentensis
NCBI taxonomy Id: 113562
Other names: A. derwentensis, ATCC 49798, DSM 43941, IFO 14935, JCM 7556, NBRC 14935, NCIB 12875, NCIB:12875, NCIMB 12875, NRRL B-16692, strain LA 107
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