STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT78292.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (281 aa)    
Predicted Functional Partners:
SDT78290.1
Multiple sugar transport system permease protein.
 
  0.972
SDT78287.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.964
SDT44319.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.909
SDT59837.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.909
SDT24989.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.902
SDS51346.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.898
SDT28797.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.894
SDS36981.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.893
SDT09231.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.893
SDT78685.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.892
Your Current Organism:
Actinoplanes derwentensis
NCBI taxonomy Id: 113562
Other names: A. derwentensis, ATCC 49798, DSM 43941, IFO 14935, JCM 7556, NBRC 14935, NCIB 12875, NCIB:12875, NCIMB 12875, NRRL B-16692, strain LA 107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.