STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT81094.1Hypothetical protein. (386 aa)    
Predicted Functional Partners:
SDT81097.1
Hypothetical protein.
 
     0.952
SDT81098.1
Hypothetical protein.
 
     0.945
SDT81091.1
Hypothetical protein.
       0.773
SDT74572.1
Hypothetical protein.
  
     0.762
SDT78884.1
Act minimal PKS acyl carrier protein.
  
     0.612
SDT74549.1
Phosphotransferase enzyme family protein.
  
     0.581
SDT18450.1
ATP-, maltotriose-and DNA-dependent transcriptional regulator MalT.
  
     0.568
SDT66616.1
Regulatory protein, luxR family.
  
     0.562
SDT66609.1
Regulatory protein, luxR family.
  
     0.549
SDT73459.1
Hypothetical protein.
  
     0.529
Your Current Organism:
Actinoplanes derwentensis
NCBI taxonomy Id: 113562
Other names: A. derwentensis, ATCC 49798, DSM 43941, IFO 14935, JCM 7556, NBRC 14935, NCIB 12875, NCIB:12875, NCIMB 12875, NRRL B-16692, strain LA 107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.