STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctpACarboxy-terminal-processing protease precursor (C-terminal-processing protease); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the peptidase S41A family. (476 aa)    
Predicted Functional Partners:
CEJ83571.1
Peptidase M23.
 
  
 0.927
secD
Protein-export membrane protein secD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
 
 
  0.672
nudH-2
(Di)nucleoside polyphosphate hydrolase (Invasion protein A)(Nudix family); Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.
 
   
 0.652
hom
Homoserine dehydrogenase (HDH); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
  0.641
CEJ84398.1
NHL repeat protein.
   
  0.614
CEJ85942.1
BNR repeat-containing glycosyl hydrolase.
   
  0.614
CEJ87381.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
   
  0.614
CEJ87526.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
   
  0.614
CEJ88781.1
Putative Peptidyl-Asp metalloendopeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
  0.614
CEJ84636.1
Putative Zinc metalloprotease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.588
Your Current Organism:
Hyphomicrobium sp. GJ21
NCBI taxonomy Id: 113574
Other names: H. sp. GJ21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.