STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEJ83873.1Extensin family protein. (228 aa)    
Predicted Functional Partners:
CEJ83874.1
Hypothetical protein; No homology to any previously reported sequences.
       0.584
CEJ83875.1
Putative transcriptional regulator, TetR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.576
CEJ87089.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.499
CEJ85772.1
DNA replication initiation ATPase.
  
     0.494
CEJ85758.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.460
CEJ83871.1
Putative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.430
CEJ83872.1
Hypothetical protein; No homology to any previously reported sequences.
       0.430
Your Current Organism:
Hyphomicrobium sp. GJ21
NCBI taxonomy Id: 113574
Other names: H. sp. GJ21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.