STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEJ85148.1Formylmethanofuran dehydrogenase subunit C. (269 aa)    
Predicted Functional Partners:
fwdA
Protein fwdA.
 
 
 0.999
ffsA
Formylmethanofuran--tetrahydromethanopterin formyltransferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family.
 
 
 0.999
CEJ85143.1
Formylmethanofuran dehydrogenase subunit B.
 
 
 0.997
mch
Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT; Belongs to the MCH family.
 
  
  0.893
CEJ85235.1
Beta-ribofuranosylaminobenzene 5'-phosphate synthase family.
 
     0.790
CEJ85237.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.790
CEJ85242.1
Triphosphoribosyl-dephospho-CoA protein.
 
     0.790
mtdB
NAD(P)-dependent methylenetetrahydromethanopterin dehydrogenase.
 
     0.788
CEJ85249.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.788
CEJ85253.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.788
Your Current Organism:
Hyphomicrobium sp. GJ21
NCBI taxonomy Id: 113574
Other names: H. sp. GJ21
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