STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEJ87120.1Putative Serine protease do-like precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the peptidase S1C family. (487 aa)    
Predicted Functional Partners:
CEJ85650.1
Putative serine protease do-like precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the peptidase S1C family.
  
  
 
0.902
CEJ85411.1
Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
  
 0.699
hflC
Protease activity modulator HflK; HflC and HflK could regulate a protease.
 
 
 0.692
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
 
     0.689
hflK
Protease activity modulator HflK; HflC and HflK could encode or regulate a protease.
 
 
 0.679
CEJ87992.1
Putative ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
 0.612
lon
ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
    
 0.607
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 
  0.588
CEJ86628.1
Catalase, homologous to the Protein srpA precursor; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
 0.584
CEJ88341.1
Catalase related subgroup; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
 0.584
Your Current Organism:
Hyphomicrobium sp. GJ21
NCBI taxonomy Id: 113574
Other names: H. sp. GJ21
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