STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS73434.1Glycosyltransferase involved in cell wall bisynthesis; Non-canonical start codon; manually curated. (403 aa)    
Predicted Functional Partners:
SDS73394.1
Magnesium transporter NIPA.
     0.953
SDS07416.1
Predicted trehalose synthase.
   
 0.808
SDS81223.1
ATP-dependent DNA helicase, Rep family.
    
 
 0.744
SDS03313.1
Hypothetical protein.
 
     0.742
SDS17496.1
UDP-glucose pyrophosphorylase.
    
 0.655
SDR84224.1
Lipid kinase, YegS/Rv2252/BmrU family.
   
 
  0.647
SDS07017.1
Lipid kinase, YegS/Rv2252/BmrU family.
   
 
  0.647
SDS76017.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.616
SDS14479.1
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
 0.591
SDS14524.1
Trehalose 6-phosphate synthase.
  
 0.591
Your Current Organism:
Brevibacterium siliguriense
NCBI taxonomy Id: 1136497
Other names: B. siliguriense, Brevibacterium siliguriense Kumar et al. 2013, Brevibacterium sp. AK-MB18, DSM 23676, LMG 25772, LMG:25772, bacterium AK-MB18, strain MB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.