Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
GAH_00331Arabinose efflux permease. (409 aa)    
Predicted Functional Partners:
GAH_00329
Nucleoside-diphosphate-sugar epimerase.
 
  
 0.835
GAH_00330
Thiamine pyrophosphate-requiring protein; Belongs to the TPP enzyme family.
 
   
 0.808
GAH_00328
3-hydroxyacyl-CoA dehydrogenase.
       0.752
GAH_00327
Putative permease.
 
   
 0.746
GAH_00326
Alcohol dehydrogenase, class IV.
  
  
 0.743
GAH_00332
Putative zinc- or iron-chelating domain.
  
  
 0.571
GAH_01322
Drug resistance transporter, EmrB/QacA subfamily.
  
     0.498
GAH_01289
Putative proteins of the AP superfamily.
 
  
 0.489
GAH_01048
Amino acid transporter.
 
 
 0.474
GAH_00333
Cytochrome C and Quinol oxidase polypeptide I.
       0.471
Your Current Organism:
Geoglobus ahangari
NCBI taxonomy Id: 113653
Other names: ATCC BAA-425, G. ahangari, Geoglobus ahangari Kashefi et al. 2002, hyperthermophile str. 234, strain 234
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