STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAH_00457Nuclease-related domain. (132 aa)    
Predicted Functional Partners:
GAH_00458
Uncharacterized protein conserved in archaea.
       0.809
GAH_00459
Putative DNA-binding protein with the Helix-hairpin-helix motif.
       0.651
top6A
DNA topoisomerase VI, subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family.
       0.494
top6B
DNA topoisomerase VI, B subunit; Relaxes both positive and negative superturns and exhibits a strong decatenase activity.
       0.494
GAH_00456
AsnC family.
       0.494
GAH_00453
Signal transduction histidine kinase.
       0.481
GAH_00449
ABC-type transport system involved in cytochrome c biogenesis, permease component.
       0.406
GAH_00451
NAD{P}-binding Rossmann-like domain.
       0.406
Your Current Organism:
Geoglobus ahangari
NCBI taxonomy Id: 113653
Other names: ATCC BAA-425, G. ahangari, Geoglobus ahangari Kashefi et al. 2002, hyperthermophile str. 234, strain 234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.