STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAH_00912Hydrogenase {NiFe} small subunit {hydA}. (355 aa)    
Predicted Functional Partners:
GAH_00910
Ni,Fe-hydrogenase I large subunit.
 
 
 0.994
GAH_02042
Ni,Fe-hydrogenase I large subunit.
 
 
 0.978
GAH_02038
Coenzyme F420-reducing hydrogenase, alpha subunit.
 
 
 0.930
GAH_02041
Hydrogenase (NiFe) small subunit (hydA).
  
  
 
0.902
GAH_02044
Ni,Fe-hydrogenase maturation factor.
 
  
 0.838
GAH_01685
Rubredoxin; Rubredoxin is a small nonheme, iron protein lacking acid- labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule.
  
 
 0.806
GAH_00911
Ni,Fe-hydrogenase I cytochrome b subunit.
     
 0.798
GAH_01186
Hypothetical protein.
 
 
 
 0.765
GAH_00490
Hypothetical protein.
   
 
 0.722
GAH_00191
{NiFe} hydrogenase maturation protein HypF.
 
 
 
 0.677
Your Current Organism:
Geoglobus ahangari
NCBI taxonomy Id: 113653
Other names: ATCC BAA-425, G. ahangari, Geoglobus ahangari Kashefi et al. 2002, hyperthermophile str. 234, strain 234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.