STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAH_011364Fe-4S binding domain/Putative Fe-S cluster. (156 aa)    
Predicted Functional Partners:
GAH_00538
Formylmethanofuran dehydrogenase, subunit F.
 
 0.998
GAH_01160
Formylmethanofuran dehydrogenase, subunit D.
 
 0.998
GAH_01137
Formylmethanofuran dehydrogenase, subunit B.
 
 
  0.997
GAH_01180
4Fe-4S dicluster domain/4Fe-4S binding domain.
 
 0.995
GAH_01158
Formylmethanofuran dehydrogenase, subunit A.
  
 0.990
GAH_01138
Formylmethanofuran dehydrogenase, subunit D.
  
 
 0.989
GAH_01159
Formylmethanofuran dehydrogenase, subunit B.
 
 
  0.989
GAH_01157
Formylmethanofuran dehydrogenase, subunit C.
  
  0.988
cdhA
acetyl-CoA decarbonylase/synthase alpha subunit; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase.
 
  
 0.944
cdhB
acetyl-CoA decarbonylase/synthase epsilon subunit; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. The precise role of the epsilon subunit is unclear; it may have a stabilizing role within the alpha(2)epsilon(2) component and/or be involved in electron transfer to FAD during a potential FAD-mediated CO oxidation. Belongs to the CdhB family.
 
  
  0.926
Your Current Organism:
Geoglobus ahangari
NCBI taxonomy Id: 113653
Other names: ATCC BAA-425, G. ahangari, Geoglobus ahangari Kashefi et al. 2002, hyperthermophile str. 234, strain 234
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.