STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAH_01286Fe-S-cluster-containing hydrogenase components 1. (249 aa)    
Predicted Functional Partners:
GAH_01287
Polysulfide reductase NrfD.
 
 0.998
GAH_01285
Respiratory nitrate reductase alpha subunit apoprotein.
 
 
 0.990
GAH_01288
Nitrate reductase delta subunit.
 
  
 0.858
GAH_02043
Methanophenazine-reducing hydrogenase, cytochrome B subunit.
  
 
 0.858
GAH_00413
Aldehyde:ferredoxin oxidoreductase.
  
 
 0.690
GAH_01728
Aldehyde:ferredoxin oxidoreductase.
  
 
 0.690
GAH_01738
Aldehyde:ferredoxin oxidoreductase.
  
 
 0.690
GAH_01822
Aldehyde:ferredoxin oxidoreductase.
  
 
 0.690
GAH_01856
Aldehyde:ferredoxin oxidoreductase.
  
 
 0.690
GAH_01669
Glutamate synthase domain 2; Belongs to the glutamate synthase family.
  
  
 0.662
Your Current Organism:
Geoglobus ahangari
NCBI taxonomy Id: 113653
Other names: ATCC BAA-425, G. ahangari, Geoglobus ahangari Kashefi et al. 2002, hyperthermophile str. 234, strain 234
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