Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAH_02027RIO-like serine/threonine protein kinase fused to N-terminal HTH domain. (285 aa)    
Predicted Functional Partners:
GAH_00868
Putative nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module.
   
 0.997
GAH_00878
KH domain protein.
   
 
 0.965
rps11
Archaeal ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.
  
 0.957
rps5
Ribosomal protein S5{archaeal type}/S2{eukaryote cytosolic type}; With S4 and S12 plays an important role in translational accuracy.
 
 0.955
GAH_00879
Serine/threonine protein kinase involved in cell cycle control.
  
0.951
rps3
Ribosomal protein S3, eukaryotic/archaeal type; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
   
 0.948
rps3ae
Ribosomal protein S3AE; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 0.948
rps6e
Ribosomal protein S6E {S10}; Belongs to the eukaryotic ribosomal protein eS6 family.
  
  0.947
rps15
SSU ribosomal protein S15P.
  
 
 0.945
rps4
Ribosomal protein S4{archaeal type}/S9{eukaryote cytosolic type}; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
   
 0.943
Your Current Organism:
Geoglobus ahangari
NCBI taxonomy Id: 113653
Other names: ATCC BAA-425, G. ahangari, Geoglobus ahangari Kashefi et al. 2002, hyperthermophile str. 234, strain 234
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