STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKH54865.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)    
Predicted Functional Partners:
OKH43331.1
Photosystem II assembly protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
  
   
 0.813
rpsO
30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
       0.779
OKH60871.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
psaL
Photosystem I reaction center protein subunit XI; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
OKH45453.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
psbW
Photosystem II reaction center protein Psb28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Psb28 family.
  
     0.770
OKH56676.1
Photosystem I reaction center subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
OKH55645.1
Photosystem II manganese-stabilizing polypeptide; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
OKH56450.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.768
OKH45096.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.768
Your Current Organism:
Scytonema sp. HK05
NCBI taxonomy Id: 1137095
Other names: S. sp. HK-05, Scytonema sp. HK-05, Scytonema sp. IAM M-291, Scytonema sp. NIES-2130
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.